'Missing optional dependency 'tables'. Use pip or conda to install tables
import sys
#import datetime as dt
import numpy as np
import pandas as pd
from pylab import plt
plt.style.use('ggplot')
import matplotlib as mpl
mpl.rcParams['font.family'] = 'serif'
def load_h5(fn):
h5 = pd.HDFStore(fn, 'r')
data = h5['data']
log_returns = h5['log_returns']
h5.close()
return data, log_returns
def save_h5(fn, data, log_returns):
h5 = pd.HDFStore(fn, 'w')
h5['data'] = data
h5['log_returns'] = log_returns
h5.close()
import os
from os.path import isfile, join
fn = join(os.getcwd(), 'stock.h5')
data, log_returns = load_h5(fn)
log_returns.head()
I wanted to read 'stock.h5' file which is place in the same folder and ran the above code. The jupyter notebook gave the error below enter image description here
I tried:
pip install --user tables
conda install --user tables
degrade pytables to 3.5.1
And none of them works
Solution 1:[1]
I ran into the same thing. The error tells you (unhelpfully) that the missing package is called tables when in fact, it's called pytables. Doing conda install pytables is all I needed to do to be able to read h5 files with pandas.
Solution 2:[2]
I think pd.to_hdf() and pd.read_hdf() could simply realize the saving and loading hdf5 files' requirements without installing the tables package.
Sources
This article follows the attribution requirements of Stack Overflow and is licensed under CC BY-SA 3.0.
Source: Stack Overflow
| Solution | Source |
|---|---|
| Solution 1 | Dharman |
| Solution 2 | LCheng |
