'Hierarchical clustering: Calcuating amountof clusters
I am working with R.
I am calculating a hierarchical cluster and plotting it. I then cut it into cluster-groups to plot again.
I have a for-loop, to do this on subsets of a database, which works fine.
The problem is, each subset of data might have a different optimal number of clusters... The solutions ive found online, to find the optimal amount of clusters, is visual.
Is there code I can run to automiatically configure the optimal number of clusters? In the code example, im looking for "noOfClusters". Also, it should be a maximum of 10...
This is how my clustering looks like, in short:
clusterResult <- agnes(singleLinkMatrix,stand = FALSE, method = "ward", metric = "euclidean")
plot(clusterResult)
clusterMember <- cutree(clusterResult, k = noOfClusters)
Thanks a lot :)
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