'R: Failing to knit on a pivot longer, despite the function working when run by itself

Kia Ora,

I am running into an issue where I have a pivot_longer() than works when I run the code and the output works and is correct. However, when I try to knitt to html I get the following error message:

Error in -`x type` : invalid argument to unary operator Calls: <Anonymous> ... lapply -> FUN -> reorder -> reorder.default -> tapply Execution halted

This is an example of the offending code:

longer_df <- df %>%
  pivot_longer(c(contains("common_phrase")),
               names_to = "x type",
               values_to = "x quantity")

Does anyone have an idea why the code works, but fails to knitt?

r r-markdown tidyverse

Solution 1:^[1]

It appears I fixed the issue by adding 'na.rm = TRUE' to my ggplot calls. Weird given that the errors were not attributed to a ggplot call.

Sources

This article follows the attribution requirements of Stack Overflow and is licensed under CC BY-SA 3.0.

Source: Stack Overflow

Solution	Source
Solution 1	Paru at R

'R: Failing to knit on a pivot longer, despite the function working when run by itself

Solution 1:[1]

Sources

Related Questions

Solution 1:^[1]