Is there a way in Pandas to use previous row value in dataframe.apply when previous value is also calculated in the apply?

Question

I have the following dataframe:

Index_Date    A   B     C    D
================================
2015-01-31    10   10   Nan   10
2015-02-01     2    3   Nan   22 
2015-02-02    10   60   Nan  280
2015-02-03    10  100   Nan  250

Require:

Index_Date    A   B    C     D
================================
2015-01-31    10   10    10   10
2015-02-01     2    3    23   22
2015-02-02    10   60   290  280
2015-02-03    10  100  3000  250

Column C is derived for 2015-01-31 by taking value of D.

Then I need to use the value of C for 2015-01-31 and multiply by the value of A on 2015-02-01 and add B.

I have attempted an apply and a shift using an if else by this gives a key error.

Answer 1

Given a column of numbers:

lst = []
cols = ['A']
for a in range(100, 105):
    lst.append([a])
df = pd.DataFrame(lst, columns=cols, index=range(5))
df

    A
0   100
1   101
2   102
3   103
4   104

You can reference the previous row with shift:

df['Change'] = df.A - df.A.shift(1)
df

    A   Change
0   100 NaN
1   101 1.0
2   102 1.0
3   103 1.0
4   104 1.0

Answer 2

numba

For recursive calculations which are not vectorisable, numba, which uses JIT-compilation and works with lower level objects, often yields large performance improvements. You need only define a regular for loop and use the decorator @njit or (for older versions) @jit(nopython=True):

For a reasonable size dataframe, this gives a ~30x performance improvement versus a regular for loop:

from numba import jit

@jit(nopython=True)
def calculator_nb(a, b, d):
    res = np.empty(d.shape)
    res[0] = d[0]
    for i in range(1, res.shape[0]):
        res[i] = res[i-1] * a[i] + b[i]
    return res

df['C'] = calculator_nb(*df[list('ABD')].values.T)

n = 10**5
df = pd.concat([df]*n, ignore_index=True)

# benchmarking on Python 3.6.0, Pandas 0.19.2, NumPy 1.11.3, Numba 0.30.1
# calculator() is same as calculator_nb() but without @jit decorator
%timeit calculator_nb(*df[list('ABD')].values.T)  # 14.1 ms per loop
%timeit calculator(*df[list('ABD')].values.T)     # 444 ms per loop

Answer 3

Applying the recursive function on numpy arrays will be faster than the current answer.

df = pd.DataFrame(np.repeat(np.arange(2, 6),3).reshape(4,3), columns=['A', 'B', 'D'])
new = [df.D.values[0]]
for i in range(1, len(df.index)):
    new.append(new[i-1]*df.A.values[i]+df.B.values[i])
df['C'] = new

Output

      A  B  D    C
   0  1  1  1    1
   1  2  2  2    4
   2  3  3  3   15
   3  4  4  4   64
   4  5  5  5  325

Answer 4

Although it has been a while since this question was asked, I will post my answer hoping it helps somebody.

Disclaimer: I know this solution is not standard, but I think it works well.

import pandas as pd
import numpy as np

data = np.array([[10, 2, 10, 10],
                 [10, 3, 60, 100],
                 [np.nan] * 4,
                 [10, 22, 280, 250]]).T
idx = pd.date_range('20150131', end='20150203')
df = pd.DataFrame(data=data, columns=list('ABCD'), index=idx)
df
               A    B     C    D
 =================================
 2015-01-31    10   10    NaN  10
 2015-02-01    2    3     NaN  22 
 2015-02-02    10   60    NaN  280
 2015-02-03    10   100   NaN  250

def calculate(mul, add):
    global value
    value = value * mul + add
    return value

value = df.loc['2015-01-31', 'D']
df.loc['2015-01-31', 'C'] = value
df.loc['2015-02-01':, 'C'] = df.loc['2015-02-01':].apply(lambda row: calculate(*row[['A', 'B']]), axis=1)
df
               A    B     C     D
 =================================
 2015-01-31    10   10    10    10
 2015-02-01    2    3     23    22 
 2015-02-02    10   60    290   280
 2015-02-03    10   100   3000  250

So basically we use a apply from pandas and the help of a global variable that keeps track of the previous calculated value.

---

Time comparison with a for loop:

data = np.random.random(size=(1000, 4))
idx = pd.date_range('20150131', end='20171026')
df = pd.DataFrame(data=data, columns=list('ABCD'), index=idx)
df.C = np.nan

df.loc['2015-01-31', 'C'] = df.loc['2015-01-31', 'D']

%%timeit
for i in df.loc['2015-02-01':].index.date:
    df.loc[i, 'C'] = df.loc[(i - pd.DateOffset(days=1)).date(), 'C'] * df.loc[i, 'A'] + df.loc[i, 'B']

3.2 s ± 114 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)

data = np.random.random(size=(1000, 4))
idx = pd.date_range('20150131', end='20171026')
df = pd.DataFrame(data=data, columns=list('ABCD'), index=idx)
df.C = np.nan

def calculate(mul, add):
    global value
    value = value * mul + add
    return value

value = df.loc['2015-01-31', 'D']
df.loc['2015-01-31', 'C'] = value

%%timeit
df.loc['2015-02-01':, 'C'] = df.loc['2015-02-01':].apply(lambda row: calculate(*row[['A', 'B']]), axis=1)

1.82 s ± 64.4 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)

So 0.57 times faster on average.

Answer 5

It's an old question but the solution below (without a for loop) might be helpful:

def new_fun(df):
    prev_value = df.iloc[0]["C"]
    def func2(row):
        # non local variable ==> will use pre_value from the new_fun function
        nonlocal prev_value
        new_value =  prev_value * row['A'] + row['B']
        prev_value = row['C']
        return new_value
    # This line might throw a SettingWithCopyWarning warning
    df.iloc[1:]["C"] = df.iloc[1:].apply(func2, axis=1)
    return df

df = new_fun(df)

Answer 6

In general, the key to avoiding an explicit loop would be to join (merge) 2 instances of the dataframe on rowindex-1==rowindex.

Then you would have a big dataframe containing rows of r and r-1, from where you could do a df.apply() function.

However the overhead of creating the large dataset may offset the benefits of parallel processing...