I have some conceal options (syntax match Normal '\.md\]' conceal cchar=]) added in a $HOME/.vim/after/syntax/base.vim. They are not loaded when I open a file.
installshield-2016
automatic-properties
chapel
fragmentation
angularjs-controller
swagger-net
graphql-php
click-through
fsc
engine.io
amazon-ion
fbml
erlang-shell
utf-8
django-signals
pandapower
arb
httpinterceptor
reakit
rodio
iis-7
chatterbot
intentfilter
r.swift
codeigniter-restapi
freetexttable
nsdateformatter
form-for
cublas
maven-compiler-plugin