Category "bioinformatics"

Bowtie2 error : " does not exist or is not a Bowtie 2 index"

I'm very new to bioinformatics and RNA-seq so go easy on me. I keep getting the same error when I try perform my analysis. For background: I have a folder calle

ungapped index for biopython alignments

My first time using biopython. Forgive me if this is a basic question. I would like to input sequences, then align them, and be able to refer to the index posi

How to handle multiple optimal edit paths implementing Needleman-Wunsche algorithm?

Trying to implement Needleman-Wunsche algorithm for biological sequences comparison. In some circumstances there exist multiple optimal edit paths. What is th